summary.fitMod: Summary function for fitMod objects

Description Usage Arguments Value See Also Examples

View source: R/createFitMod.R

Description

Function for creating a short summary of the contents of a TP object. The summary consists of the name of the experiment, the number of time points, the engine used to fit the models and, in case spatial models where fitted using asreml, the selected spatial model.

Usage

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## S3 method for class 'fitMod'
summary(object, ...)

Arguments

object

An object of class fitMod.

...

Ignored.

Value

No return value, a summary is printed.

See Also

Other functions for spatial modeling: fitModels(), getCorrected(), getEffDims(), getGenoPred(), getHerit(), getVar(), plot.fitMod()

Examples

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## Using the first example dataset (PhenovatorDat1):
## Create an object of class TP.
phenoTP <- createTimePoints(dat = PhenovatorDat1,
                            experimentName = "Phenovator",
                            genotype = "Genotype",
                            timePoint = "timepoints",
                            repId = "Replicate",
                            plotId = "pos",
                            rowNum = "y", colNum = "x",
                            addCheck = TRUE,
                            checkGenotypes = c("check1", "check2",
                                               "check3", "check4"))

## Fit a SpATS model on few time points:
modPhenoSp <- fitModels(TP = phenoTP,
                        trait = "EffpsII",
                        timePoints = c(1, 6, 36))

## Create a summary.
summary(modPhenoSp)

statgenHTP documentation built on Sept. 15, 2021, 5:06 p.m.