| corr_test | R Documentation |
Parametric, non-parametric, robust, and Bayesian correlation test.
corr_test(
data,
x,
y,
type = "parametric",
digits = 2L,
conf.level = 0.95,
tr = 0.2,
bf.prior = 0.707,
...
)
data |
A data frame (or a tibble) from which variables specified are to
be taken. Other data types (e.g., matrix, table, array, etc.) will not
be accepted. Additionally, grouped data frames from |
x |
The column in |
y |
The column in |
type |
A character specifying the type of statistical approach:
You can specify just the initial letter (e.g. |
digits |
Number of digits for rounding or significant figures. May also
be |
conf.level |
Scalar between |
tr |
Trim level for the mean when carrying out |
bf.prior |
A number between |
... |
Additional arguments (currently ignored). |
The returned object is a tibble data frame with the additional class
"statsExpressions". The exact set of columns depends on the test and, for
functions that accept a type argument, on the chosen analysis (parametric,
non-parametric, robust, or Bayesian). Any given call therefore returns some
(not all) of the columns below.
Hypothesis testing
statistic: the numeric value of a statistic
df: the numeric value of a parameter being modeled (often degrees
of freedom for the test)
df.error and df: relevant only if the statistic in question has
two degrees of freedom (e.g. anova)
p.value: the p-value associated with the observed statistic (two-sided
unless a one-sided alternative is requested, where supported)
method: the name of the inferential statistical test
Effect size estimation
effectsize: the name of the effect size
estimate: estimated value of the effect size
conf.level: the coverage level of the confidence/credible interval
(e.g. 0.95); the interval itself spans conf.low to conf.high
conf.low: lower bound for the effect size estimate
conf.high: upper bound for the effect size estimate
conf.method: method used to compute the confidence/credible interval
conf.distribution: statistical distribution for the effect
Bayesian analysis (only when type = "bayes")
bf10: Bayes factor for the alternative hypothesis relative to the null
log_e_bf10: natural logarithm of the Bayes factor (present for most, but
not all, Bayesian analyses)
prior.distribution, prior.scale, prior.location: prior specification
used to compute the Bayes factor and posterior estimates
Pairwise comparisons (for pairwise_comparisons() and
pairwise_contingency_table())
group1, group2: the two levels being compared
p.adjust.method: the adjustment method used for multiple comparisons
p.value.adj: the adjusted p-value; returned by
pairwise_contingency_table(). Note that pairwise_comparisons() instead
folds the adjusted value into p.value (and does not return a separate
p.value.adj column)
Common columns
n.obs: number of observations
expression: a list-column of pre-formatted
plotmath expressions; each
element is a language object (not a character string) containing the
statistical details, ready to be used in {ggplot2} (e.g. in labs() or
annotate())
For a per-function, column-by-column breakdown of the output (and an explanation
of the internal add_expression_col() engine that builds the expression
column), see the Return value schema
article. For more examples, see the data frame output vignette.
The table below provides summary about:
statistical test carried out for inferential statistics
type of effect size estimate and a measure of uncertainty for this estimate
functions used internally to compute these details
Hypothesis testing and Effect size estimation
| Type | Test | CI available? | Function used |
| Parametric | Pearson's correlation coefficient | Yes | correlation::correlation() |
| Non-parametric | Spearman's rank correlation coefficient | Yes | correlation::correlation() |
| Robust | Winsorized Pearson's correlation coefficient | Yes | correlation::correlation() |
| Bayesian | Bayesian Pearson's correlation coefficient | Yes | correlation::correlation() |
Patil, I., (2021). statsExpressions: R Package for Tidy Dataframes and Expressions with Statistical Details. Journal of Open Source Software, 6(61), 3236, https://doi.org/10.21105/joss.03236
# for reproducibility
set.seed(123)
# ----------------------- parametric -----------------------
corr_test(mtcars, wt, mpg, type = "parametric")
# ----------------------- non-parametric -------------------
corr_test(mtcars, wt, mpg, type = "nonparametric")
# ----------------------- robust ---------------------------
corr_test(mtcars, wt, mpg, type = "robust")
# ----------------------- Bayesian -------------------------
corr_test(mtcars, wt, mpg, type = "bayes")
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