surface: Fitting Hansen Models to Investigate Convergent Evolution

SURFACE is a data-driven phylogenetic comparative method for fitting stabilizing selection models to continuous trait data, building on the ouch package. The main functions fit a series of Hansen models using stepwise AIC, then identify cases of convergent evolution where multiple lineages have shifted to the same adaptive peak.

Package details

AuthorTravis Ingram
MaintainerTravis Ingram <[email protected]>
LicenseGPL (>= 2)
Version0.4-1
URL http://www.people.fas.harvard.edu/~ingram/web/surface.html
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("surface")

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surface documentation built on May 2, 2019, 10:48 a.m.