getBranchTimes: Extract Branching Times from an 'ouch' Tree

Description Usage Arguments Value Author(s) References

Description

Extracts the time from root of each node in an ouchtree or hansentree formatted phylogenetic tree; used to compute the timing of regime shifts in a Hansen model

Usage

1

Arguments

h

Fitted ouchtree or hansentree object

Value

A vector of branching times

Author(s)

Travis Ingram

References

Ingram, T. & Mahler, D.L. (2013) SURFACE: detecting convergent evolution from comparative data by fitting Ornstein-Uhlenbeck models with stepwise AIC. Methods in Ecology and Evolution 4: 416-425.



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