surfaceDemo: Tree and Data for Demonstrating SURFACE

Description Usage Format Source References


This simulated tree and data set can be used to demonstrate the functionality of SURFACE. The vignette ‘surface_tutorial’ demonstrates the use of the various functions included in the package using surfaceDemo




A list containing a tree in phylo format (surfaceDemo$tree), and a list surfaceDemo$sim, which contains trait data (surfaceDemo$sim$data) and the other features output by surfaceSimulate, including the generating Hansen model (surfaceDemo$sim$fit)


simulated data


Ingram, T. & Mahler, D.L. (2013) SURFACE: detecting convergent evolution from comparative data by fitting Ornstein-Uhlenbeck models with stepwise AIC. Methods in Ecology and Evolution 4: 416-425.

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