Man pages for sybilccFBA
Cost Constrained Flux Balance Analysis (ccFBA): MetabOlic Modeling with ENzyme kineTics (MOMENT)
| addGlcTrns | add Glucose Transport constraint |
| calc_MW | Calculate molecular weights |
| cfba_moment | Function: cfba_moment: implement MOMENT method |
| cfba_moment_mr | Function: cfba_moment_mr: implement MOMENT method taking into... |
| cfba_moment_pw | Function: cfba_moment_pw: implement MOMENT method |
| getccFBA_mat | getccFBA_mat: get ccFBA model as a constraint matrix |
| getGpr1iso | Choose the the smallest isoenzyme |
| getRevFlux | get fluxes of reversible model |
| iAF1260 | Escherichia coli Metabolic Model iAF1260 |
| iJO1366 | Escherichia coli Metabolic Model iJO1366 |
| iML1515 | Escherichia coli Metabolic Model iML1515 |
| iMM904 | Saccharomyces cerevisiae Metabolic Model |
| initialize-methods | Initialize Problem Object |
| kcat | Escherichia coli KCAT values used in MOMENT method |
| mw | Escherichia coli molecular weight values used in MOMENT... |
| mw_iML1515 | SEColi metabolic genes molecular weight values used in... |
| readmodel | read MOMENT model |
| simulate_EColi | Simulate Ecoli |
| sybilccFBA-package | Cost Constrained Flux Balance Analysis(ccFBA) |
| sysBiolAlg_ccFBA-class | Class '"sysBiolAlg_ccFBA"' |
| yst_kcat | Saccharomyces cerevisiae KCAT values used in MOMENT method |
| yst_mw | Saccharomyces cerevisiae molecular weight values used in... |
