readmodel: read MOMENT model

Description Usage Arguments Value Author(s) References See Also

View source: R/readmodel.R

Description

create lp from lists generated from MATLAB MOMENT model.

Usage

1
readmodel(mat, mets, rxns, rbnds, cbnds, solver = "glpkAPI")

Arguments

mat

contain the constraints matrix

mets

list of metabolites

rxns

list of reactions and their bounds

rbnds

bounds of rows of constraint matrix

cbnds

bounds of columns of constraint matrix

solver

solver used to solve the lp, can be glpkAPI or cplexAPI

Value

return fluxes obtained using the lp.

Author(s)

Abdelmoneim Amer Desouki

References

Adadi, R., Volkmer, B., Milo, R., Heinemann, M., & Shlomi, T. (2012). Prediction of Microbial Growth Rate versus Biomass Yield by a Metabolic Network with Kinetic Parameters, 8(7). doi:10.1371/journal.pcbi.1002575

See Also

cfba_moment


sybilccFBA documentation built on Dec. 16, 2019, 1:34 a.m.