batch_voistat: Obtain values from voistat files (using load_voistat() for a...

In tacmagic: Positron Emission Tomography Time-Activity Curve Analysis

Description

For a vector of participant IDs and correspondingly named .voistat files, this extracts the value from the files for the specified ROIs. participants can also be a vector of filenames, in which case set dir="" and filesuffix="", as in the example.

Usage

batch_voistat(
  participants,
  ROI_def,
  dir = "",
  filesuffix = ".voistat",
  varname = "VALUE"
)

Arguments

participants	A vector of participant IDs
ROI_def	Object that defines combined ROIs, see ROI_definitions.R
dir	Directory and/or filename prefix of the files
filesuffix	Optional filename characters between ID and ".voistat"
varname	The name of the variable being extracted, e.g. "SRTM"

Details

See load_voistat() for specifics.

Value

A table of values for the specified ROIs for all participants

See Also

Other Batch functions: batch_load(), batch_tm()

Examples

participants <- c(system.file("extdata", "AD06_BPnd_BPnd_Logan.voistat", 
                              package="tacmagic"),
                   system.file("extdata", "AD07_BPnd_BPnd_Logan.voistat", 
                               package="tacmagic"),
                   system.file("extdata", "AD08_BPnd_BPnd_Logan.voistat", 
                               package="tacmagic"))

batchtest <- batch_voistat(participants=participants, ROI_def=roi_ham_pib(), 
                           dir="", filesuffix="", varname="Logan") 

tacmagic documentation built on Dec. 15, 2020, 5:13 p.m.