tcpl: ToxCast Data Analysis Pipeline

The ToxCast Data Analysis Pipeline ('tcpl') is an R package that manages, curve-fits, plots, and stores ToxCast data to populate its linked MySQL database, 'invitrodb'. The package was developed for the chemical screening data curated by the US EPA's Toxicity Forecaster (ToxCast) program, but 'tcpl' can be used to support diverse chemical screening efforts.

Package details

AuthorDayne L Filer [aut], Jason Brown [ctb] (ORCID: <https://orcid.org/0009-0000-2294-641X>), Madison Feshuk [cre] (ORCID: <https://orcid.org/0000-0002-1390-6405>), Carter Thunes [ctb], Sarah E Davidson-Fritz [ctb] (ORCID: <https://orcid.org/0000-0002-2891-9380>), Kelly Carstens [ctb] (ORCID: <https://orcid.org/0000-0002-1746-5379>), Elizabeth Gilson [ctb], Lindsay Knupp [ctb], Lori Kolaczkowski [ctb], Ashley Ko [ctb], Zhihui Zhao [ctb], Kurt Dunham [ctb], Todd Zurlinden [ctb] (ORCID: <https://orcid.org/0000-0003-1372-3913>), Parth Kothiya [ctb], Woodrow R Setzer [ctb], Matthew T Martin [ctb, ths], Richard S Judson [ctb, ths] (ORCID: <https://orcid.org/0000-0002-2348-9633>), Katie Paul Friedman [ctb] (ORCID: <https://orcid.org/0000-0002-2710-1691>)
MaintainerMadison Feshuk <feshuk.madison@epa.gov>
LicenseMIT + file LICENSE
Version3.3.0
URL https://github.com/USEPA/CompTox-ToxCast-tcpl https://www.epa.gov/comptox-tools/toxicity-forecasting-toxcast
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("tcpl")

Try the tcpl package in your browser

Any scripts or data that you put into this service are public.

tcpl documentation built on June 8, 2025, 11:41 a.m.