mc5: Perform level 5 multiple-concentration processing

In tcpl: ToxCast Data Analysis Pipeline

Perform level 5 multiple-concentration processing

Description

mc5 loads level 4 data from the tcpl database for the given id and performs level 5 multiple-concentration processing. The processed data is then loaded into the mc5 table and all subsequent data is deleted with tcplCascade. See details for more information.

The individual processing functions are no longer exported, as it is typically more convenient and suggested to use the tcplRun wrapper function.

Arguments

ae	Integer of length 1, assay endpoint id (aeid) for processing.
wr	Logical, whether the processed data should be written to the tcpl database

Details

Level 5 multiple-concentration hit-calling uses the fit parameters and the activity cutoff methods from mc5_aeid and mc5_methods to make an activity call and identify the winning model for each fit.

Value

A boolean of length 1, indicating the success of the processing, or when 'wr' is FALSE, a list where the first element is a boolean indicating the success of processing and the second element is a data.table containing the processed data

See Also

Method functions, MC5_Methods

Other multiple-concentration: mc1(), mc2(), mc3(), mc4(), mc6()

tcpl documentation built on Oct. 7, 2023, 1:06 a.m.