API for tidytree
A Tidy Tool for Phylogenetic Tree Data Manipulation

Global functions
%<>% Man page
%>% Man page
.data Man page
.extract_annotda.treedata Source code
.internal_add_isTip Source code Source code
.internal_nest Source code
.internal_print.treedata_msg Source code
.onAttach Source code
.update.phylo.rename Source code
.update.td.join Source code
.update.td.rename Source code
.update.treedata Source code
MRCA Man page Source code
MRCA.tbl_tree Source code
MRCA.tbl_tree_internal Source code
`[.treedata` Source code
`[[.treedata` Source code
ancestor Man page Source code
ancestor.tbl_tree Man page Source code
arrange Man page
as.phylo Man page
as.phylo.tbl_tree Source code
as.phylo.treedata Source code
as.treedata Man page Source code
as.treedata.tbl_tree Man page Source code
as_tibble Man page
as_tibble.phylo Source code
as_tibble.treedata Source code
check_names_from_phylo Source code
child Man page Source code
child.tbl_tree Man page Source code
drop_class Source code
fields_wrap Source code
filter Man page
filter.ggtree Source code
filter.treedata Source code
full_join Man page
get.data Man page
get.data,treedata-method Man page
get.fields Man page
get.fields,treedata Man page
get.fields,treedata-method Man page
get.fields.data Source code
get.fields.extraInfo Source code
get.fields.treedata Source code
get_tree_data Man page Source code
groupClade Man page Source code
groupClade.tbl_tree Source code
groupOTU Man page Source code
groupOTU.tbl_tree Source code
groupOTU.tbl_tree_item Source code
has_fields Source code
itself Source code
left_join Man page
left_join.phylo Source code
left_join.treedata Source code
merge.tbl_tree Source code
mutate Man page
mutate.tbl_tree Source code
mutate.treedata Source code
nodeid Man page Source code
nodeid.tbl_tree Source code
nodelab Man page Source code
nodelab.tbl_tree Source code
offspring Man page Source code
offspring.tbl_tree Man page Source code
offspring.tbl_tree_item Source code
parent Man page Source code
parent.tbl_tree Man page Source code
print.treedata Source code
print1.treedata Source code
print2.treedata Source code
print_fields Source code
pull Man page
pull.treedata Source code
random_ref Source code
reexports Man page
rename Man page
rename.treedata Source code
rootnode Man page Source code
rootnode.tbl_tree Source code
select Man page
select.ggtree Source code
select.treedata Source code
show Man page
show,treedata-method Man page
sibling Man page Source code
sibling.tbl_tree Source code
summarise Man page
summarize Man page
tibble Man page
transmute Man page
treedata Man page Source code
treedata-class Man page
unnest Man page
unnest.treedata Source code
valid.tbl_tree Source code
tidytree documentation built on Dec. 28, 2022, 2:02 a.m.