genotypeFasta | R Documentation |
genotypeFasta
converts a genotype table into a vector of nucleotide
sequences.
genotypeFasta(genotype, germline_db, novel = NA)
genotype |
|
germline_db |
vector of named nucleotide germline sequences
matching the alleles detailed in |
novel |
an optional |
A named vector of strings containing the germline nucleotide sequences of the alleles in the provided genotype.
inferGenotype
# Find the sequences that correspond to the genotype
genotype_db <- genotypeFasta(SampleGenotype, SampleGermlineIGHV, SampleNovel)
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