inst/doc/my-vignette.R

## ---- eval=FALSE, tidy=TRUE----------------------------------------------
#  rowSums(cpm(data)>100) >= 2

## ---- eval=FALSE, tidy=TRUE----------------------------------------------
#  data(pAbp)
#  attach(pAbp)
#  model.fit <- timeSeq(data.count,group.label,gene.names,exon.length,exon.level=TRUE,pvalue=FALSE)
#  detach(pAbp)
#  

## ---- eval=FALSE, tidy=TRUE----------------------------------------------
#  model.fit$NPDE
#  model.fit$PDE
#  

## ---- eval=FALSE, tidy=TRUE----------------------------------------------
#  data(simulate.dt)
#  attach(simulate.dt)
#  model.fit <- timeSeq(data.count,group.label,gene.names,exon.level=FALSE,pvalue=FALSE)
#  timeSeq.screeplot(model.fit, "lines")

## ----  eval=FALSE, tidy=TRUE---------------------------------------------
#  data(simulate.dt)
#  attach(simulate.dt)
#  model.fit <- timeSeq(data.count,group.label,gene.names,exon.level=FALSE,pvalue=FALSE)
#  timeSeq.heatmap(model.fit,n=10)

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timeSeq documentation built on May 2, 2019, 3:07 a.m.