|Are the sequences TMHs?
|Checks the installation of TMHMM. Throws a helpful error...
|Check if the topology is valid.
|This function does nothing. It is intended to inherit is...
|Get the default path to the TMHMM binary
|Get the path to the folder where this package installs TMHMM...
|Get an URL to download TMHMM from. These URLs expire.
|Install NetMHC2pan to a local folder
|Install the NetMHC2pan binary to a local folder
|Is the line of text the locatome, as used within a FASTA...
|Determines if the environment is Travis CI
|Is the line of text the name of a protein, as used within a...
|Determine if the protein sequence contains at least one TMH.
|Measure if TMHMM binary is installed locally
|Measure if TMHMM is installed locally
|Is the text a TMHMM result text?
|Determine if TMHMM is set up
|Is the download URL valid?
|Convert a multi-line locatome to a tidy data frame
|Plot the locatome
|Run TMHMM directy on a protein sequence
|Creates a FASTA-like file, that has the locations of the...
|Set up TMHMM
|Tally each location in a locatome
|Count the number of transmembrane helices in a topology
|tmhmm: estimate the topoplogy of membrane proteins
|Self-test the TMHMM installation
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