Description Author(s) Examples
Each amino acid that is part a membrane protein can be located either in the cytosol, membrane or at the exterior. 'tmhmm' estimate this topology
Richèl J.C. Bilderbeek
1 2 3 4 5 6 7 8 9 10 11 12 13 | if (is_tmhmm_installed()) {
fasta_filename <- system.file("extdata", "tmhmm.fasta", package = "tmhmm")
locatome <- run_tmhmm(fasta_filename)
# Show as text
message(locatome, sep = "\n")
# Show as data frame
message(locatome_to_df(locatome))
# Show as plot
plot_locatome(locatome)
}
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