render.significant.cliques | R Documentation |
This function highlights the significant cliques on the moralized and triangulated graph. Different colors correspond to different values of -log(pvalue)
render.significant.cliques(info, alpha)
info |
the result of |
alpha |
p-value cutoff to define significant cliques |
Massa, M.S., Chiogna, M., Romualdi, C. (2010). Gene set analysis exploiting the topology of a pathway. BMC Systems Biology, 4:121 https://bmcsystbiol.biomedcentral.com/articles/10.1186/1752-0509-4-121
clique.var.test
, clique.mean.test
.
data(examples)
info <- clique.var.test(y1, y2, dag_bcell, 0.1)
## Not run: render.significant.cliques(info)
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