R2_CD_UKBB: Example dataset including the R2 column for the locuszoom...
In topr: Create Custom Plots for Viewing Genetic Association Results
R2_CD_UKBB R Documentation
Example dataset including the R2 column for the locuszoom plot function
Description
The dataset is a subset of CD_UKBB and only includes variants above and near the IL23R gene on chromosome 1
Usage
R2_CD_UKBB
Format
A data frame with 329 rows and 5 variables:
- CHROM
Chromosome, written as for example chr1 or 1
- POS
genetic position of the variant
- ID
Variant identifier, e.g. rsid
- P
P-value from Plink run, additive model, regression model GLM_FIRTH
- R2
variant correlation (r^2)
Source
A subset of the CD_UKBB dataset
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| R2_CD_UKBB | R Documentation |
Example dataset including the R2 column for the locuszoom plot function
Description
The dataset is a subset of CD_UKBB and only includes variants above and near the IL23R gene on chromosome 1
Usage
R2_CD_UKBB
Format
A data frame with 329 rows and 5 variables:
- CHROM
Chromosome, written as for example chr1 or 1
- POS
genetic position of the variant
- ID
Variant identifier, e.g. rsid
- P
P-value from Plink run, additive model, regression model GLM_FIRTH
- R2
variant correlation (r^2)
Source
A subset of the CD_UKBB dataset
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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