Files in tracerer
Tracer from R
MD5
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/calc_stderr_mean.R
R/remove_burn_ins.R
R/calc_summary_stats.R
R/parse_beast_log.R
R/parse_beast_posterior.R
R/get_paths.R
R/get_tracerer_tempfilename.R
R/tracerer-package.R
R/calc_act.R
R/default_params_doc.R
R/is_posterior.R
R/calc_geom_mean.R
R/check_trace.R
R/is_trees_posterior.R
R/calc_esses.R
R/save_beast_trees.R
R/parse_beast_output_files.R
R/cs_std_dev.R
R/calc_hpd_interval.R
R/parse_beast_trees.R
R/parse_beast_tracelog_file.R
R/get_path.R
R/count_trees_in_file.R
R/save_beast_estimates.R
R/remove_burn_in.R
R/calc_mode.R
R/extract_operators_lines.R
R/calc_ess.R
R/is_trees_file.R
R/parse_beast_state.R
src/RcppExports.cpp
src/calc_std_error_of_mean_cpp.h
src/calc_act_cpp.cpp
src/calc_std_error_of_mean_cpp.cpp
src/calc_act_cpp.h
inst/CITATION
inst/WORDLIST
inst/doc/demo.Rmd
inst/doc/demo.R
inst/doc/demo.html
inst/extdata/anthus_2_4_b.trees
inst/extdata/beast2_example_output.log
inst/extdata/unplottable_anthus_aco.trees
inst/extdata/mcbette_issue_8.trees
inst/extdata/beast2_example_output.xml
inst/extdata/beast2_example_output.xml.state
inst/extdata/anthus_2_4_a.trees
inst/extdata/missing_end.trees
inst/extdata/anthus_2_4.state
inst/extdata/anthus_2_4.log
inst/extdata/anthus_nd2.fas
inst/extdata/beast2_example_output.trees
inst/extdata/anthus_aco.fas
inst/extdata/anthus_2_4.xml
build/vignette.rds
vignettes/demo.Rmd
vignettes/tracer_trace_posterior.png
vignettes/densitree_example_output.png
vignettes/tracer_distr_posterior.png
vignettes/tracerer_logo.png
vignettes/tracer_example_output.png
man/parse_beast_trees.Rd
man/extract_operators_lines.Rd
man/calc_mode.Rd
man/parse_beast_output_files.Rd
man/count_trees_in_file.Rd
man/calc_stderr_mean.Rd
man/get_tracerer_tempfilename.Rd
man/cs_std_dev.Rd
man/tracerer-package.Rd
man/is_posterior.Rd
man/calc_esses.Rd
man/calc_summary_stats_trace.Rd
man/save_beast_trees.Rd
man/calc_summary_stats_traces.Rd
man/calc_summary_stats.Rd
man/remove_burn_in.Rd
man/parse_beast_tracelog_file.Rd
man/parse_beast_state_operators.Rd
man/calc_act_cpp.Rd
man/remove_burn_ins.Rd
man/calc_hpd_interval.Rd
man/default_params_doc.Rd
man/calc_std_error_of_mean_cpp.Rd
man/save_beast_estimates.Rd
man/get_tracerer_paths.Rd
man/is_trees_file.Rd
man/calc_act.Rd
man/check_trace.Rd
man/calc_act_r.Rd
man/calc_geom_mean.Rd
man/parse_beast_log.Rd
man/is_trees_posterior.Rd
man/get_tracerer_path.Rd
man/parse_beast_posterior.Rd
man/calc_ess.Rd
man/figures/GitHubActions.png
man/figures/AppVeyor.png
man/figures/TravisCI.png
man/figures/Codecov.png
man/figures/tracerer_logo.png
