avg_vert_depth: Average vertex depth metric
In treestats: Phylogenetic Tree Statistics
View source: R/avg_vertex_depth.R
avg_vert_depth R Documentation
Average vertex depth metric
Description
The average vertex depth metric, measures the average path
(in edges), between the tips and the root.
Usage
avg_vert_depth(phy)
Arguments
phy
phylo object or ltable
Value
Average depth (in number of edges)
References
C. Colijn and J. Gardy. Phylogenetic tree shapes resolve disease
transmission patterns. Evolution, Medicine, and Public Health,
2014(1):96-108, 2014. ISSN 2050-6201. doi: 10.1093/emph/eou018.
treestats documentation built on Sept. 14, 2024, 9:08 a.m.
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View source: R/avg_vertex_depth.R
| avg_vert_depth | R Documentation |
Average vertex depth metric
Description
The average vertex depth metric, measures the average path (in edges), between the tips and the root.
Usage
avg_vert_depth(phy)
Arguments
phy |
phylo object or ltable |
Value
Average depth (in number of edges)
References
C. Colijn and J. Gardy. Phylogenetic tree shapes resolve disease transmission patterns. Evolution, Medicine, and Public Health, 2014(1):96-108, 2014. ISSN 2050-6201. doi: 10.1093/emph/eou018.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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