cherries: Cherry index
In treestats: Phylogenetic Tree Statistics
cherries R Documentation
Cherry index
Description
Calculate the number of cherries, from the phyloTop package.
A cherry is a pair of sister tips.
Usage
cherries(input_obj, normalization = "none")
Arguments
input_obj
phylo object or ltable
normalization
"none", "yule", or "pda", the found number of
cherries is divided by the expected number, following
McKenzie & Steel 2000.
Value
number of cherries
References
McKenzie, Andy, and Mike Steel. "Distributions of cherries for
two models of trees." Mathematical biosciences 164.1 (2000): 81-92.
treestats documentation built on Sept. 14, 2024, 9:08 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| cherries | R Documentation |
Cherry index
Description
Calculate the number of cherries, from the phyloTop package. A cherry is a pair of sister tips.
Usage
cherries(input_obj, normalization = "none")
Arguments
input_obj |
phylo object or ltable |
normalization |
"none", "yule", or "pda", the found number of cherries is divided by the expected number, following McKenzie & Steel 2000. |
Value
number of cherries
References
McKenzie, Andy, and Mike Steel. "Distributions of cherries for two models of trees." Mathematical biosciences 164.1 (2000): 81-92.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.