xmu_gsem_extract_snp_path: Extract SNP Effect from a Fitted Model
In umx: Structural Equation Modeling and Twin Modeling in R
xmu_gsem_extract_snp_path R Documentation
Extract SNP Effect from a Fitted Model
Description
Inspects a fitted MxModel (or model summary) and extracts the estimate and
standard error for the specified SNP path. Used internally by umxGSEM_GWAS
during the fallback/OpenMx standard loop.
Usage
xmu_gsem_extract_snp_path(fit, traits, snpEffect = "SNP_to_F1")
Arguments
fit
A fitted MxModel or its summary object.
traits
Character vector of the base trait names.
snpEffect
Character string indicating the name of the parameter to extract.
Defaults to "SNP_to_F1".
Value
A list containing:
-
est: The parameter estimate.
-
se: The standard error of the estimate.
-
se_source: Character indicating the source of the SE (e.g., "openmx").
-
lab: The parameter label.
umx documentation built on Oct. 11, 2026, 5:07 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| xmu_gsem_extract_snp_path | R Documentation |
Extract SNP Effect from a Fitted Model
Description
Inspects a fitted MxModel (or model summary) and extracts the estimate and
standard error for the specified SNP path. Used internally by umxGSEM_GWAS
during the fallback/OpenMx standard loop.
Usage
xmu_gsem_extract_snp_path(fit, traits, snpEffect = "SNP_to_F1")
Arguments
fit |
A fitted |
traits |
Character vector of the base trait names. |
snpEffect |
Character string indicating the name of the parameter to extract.
Defaults to |
Value
A list containing:
-
est: The parameter estimate. -
se: The standard error of the estimate. -
se_source: Character indicating the source of the SE (e.g., "openmx"). -
lab: The parameter label.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.