Files in vprr
Processing and Visualization of Video Plankton Recorder Data
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/data.R
R/create_sample_data.R
R/clf_check_test.R
R/EC_functions.R
inst/WORDLIST
inst/doc/VPR_processing.Rmd
inst/doc/VPR_processing.R
inst/doc/VPR_processing.html
inst/extdata/COR2019002/rois/vpr5/d222/h04ctd.dat
inst/extdata/COR2019002/rois/vpr5/d222/h03ctd.dat
inst/extdata/COR2019002/rois/vpr5/d222/h03/roi.2245992200.tif
inst/extdata/COR2019002/rois/vpr5/d222/h03/roi.2245824300.tif
inst/extdata/COR2019002/rois/vpr5/d222/h03/roi.2247313300.tif
inst/extdata/COR2019002/rois/vpr5/d222/h03/roi.2247270500.tif
inst/extdata/COR2019002/rois/vpr5/d222/h03/roi.2245984500.tif
inst/extdata/COR2019002/rois/vpr5/d222/h04/roi.2520295400.tif
inst/extdata/COR2019002/rois/vpr5/d222/h04/roi.2520272400.tif
inst/extdata/COR2019002/rois/vpr5/d222/h04/roi.2520170000.tif
inst/extdata/COR2019002/rois/vpr5/d222/h04/roi.2520467600.tif
inst/extdata/COR2019002/rois/vpr5/d222/h04/roi.2520578900.tif
inst/extdata/COR2019002/autoid/marine_snow/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/marine_snow/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/marine_snow/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/marine_snow/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/Calanus/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/Calanus/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/Calanus/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/Calanus/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/bad_image_malfunction/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/bad_image_malfunction/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/bad_image_malfunction/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/bad_image_malfunction/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/Other/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/Other/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/Other/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/Other/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/bad_image_blurry/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/bad_image_blurry/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/bad_image_blurry/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/bad_image_blurry/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/bad_image_strobe/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/bad_image_strobe/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/bad_image_strobe/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/bad_image_strobe/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/krill/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/krill/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/krill/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/krill/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/small_copepod/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/small_copepod/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/small_copepod/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/small_copepod/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/ctenophores/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/ctenophores/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/ctenophores/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/ctenophores/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/chaetognaths/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/chaetognaths/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/chaetognaths/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/chaetognaths/aid/sep20_2svmaid.d222.h03
inst/extdata/COR2019002/autoid/stick/aidmea/sep20_2svmaid.mea.d222.h03
inst/extdata/COR2019002/autoid/stick/aidmea/sep20_2svmaid.mea.d222.h04
inst/extdata/COR2019002/autoid/stick/aid/sep20_2svmaid.d222.h04
inst/extdata/COR2019002/autoid/stick/aid/sep20_2svmaid.d222.h03
build/vignette.rds
tests/testthat.R
tests/testthat/test_data_merging.R
tests/testthat/test_read_files.R
tests/testthat/test_bin_calculate.R
vignettes/station_names_COR2019002.csv
vignettes/vp_flowchart.png
vignettes/clf_check_3.png
vignettes/VPR_processing.Rmd
vignettes/conPlot_cal_dens.png
vignettes/r_flowchart.png
data/roimeas_dat_combine.rda
data/size_df_f.rda
data/roi_dat_combine.rda
data/ctd_roi_oce.rda
data/ctd_dat_combine.rda
data/taxa_conc_n.rda
data/ctd_roi_merge.rda
man/vpr_oce_create.Rd
man/ctd_roi_oce.Rd
man/vpr_plot_histsize.Rd
man/vpr_plot_TScat.Rd
man/vpr_img_check.Rd
man/vpr_summary.Rd
man/vpr_autoid_check.Rd
man/taxa_conc_n.Rd
man/getRoiMeasurements.Rd
man/ctd_df_cols.Rd
man/vp_plot_matrix.Rd
man/size_df_f.Rd
man/ctd_dat_combine.Rd
man/bin_cast.Rd
man/vpr_img_category.Rd
man/bin_calculate.Rd
man/roi_dat_combine.Rd
man/vpr_hour.Rd
man/vpr_size_bin.Rd
man/vpr_plot_sizefreq.Rd
man/vpr_ctdroi_merge.Rd
man/vpr_trrois_size.Rd
man/vpr_category.Rd
man/concentration_category.Rd
man/ctd_roi_merge.Rd
man/vpr_ctd_read.Rd
man/vpr_roi.Rd
man/normalize_matrix.Rd
man/vpr_ctdroisize_merge.Rd
man/vp_plot_unkn.Rd
man/ctd_cast.Rd
man/vpr_category_create.Rd
man/vpr_img_copy.Rd
man/vpr_autoid_read.Rd
man/roimeas_dat_combine.Rd
man/vpr_day.Rd
man/insertRow.Rd
man/vpr_plot_contour.Rd
man/vpr_plot_TS.Rd
man/px_to_mm.Rd
man/vpr_pred_read.Rd
man/vpr_roi_concentration.Rd
man/vpr_save.Rd
man/vpr_ctd_ymd.Rd
man/vpr_autoid_create.Rd
man/vpr_manual_classification.Rd
man/vpr_img_reclassified.Rd
man/isopycnal_calculate.Rd
man/vpr_plot_profile.Rd
man/vpr_ctd_files.Rd
man/vpr_dayhour.Rd
man/vpr_autoid_copy.Rd
man/vpr_img_depth.Rd
man/figures/vprr_hex.png
