getRoiMeasurements: THIS FUNCTION HAS BEEN DEPRECATED

In vprr: Processing and Visualization of Video Plankton Recorder Data

THIS FUNCTION HAS BEEN DEPRECATED

Description

pull roi measurements from all taxa, all files

Usage

getRoiMeasurements(taxafolder, nchar_folder, unit = "mm", opticalSetting)

Arguments

taxafolder	path to taxa folder (base – autoid folder)
nchar_folder	number of characters in basepath
unit	unit data will be output in, 'mm' (default – millimetres) or 'px' (pixels)
opticalSetting	VPR optical setting determining conversion between pixels and millimetres (options are 'S0', 'S1', 'S2', or 'S3')

Note

This function is very finicky, easily broken because it relies on character string splitting. taxaFolder argument should not end in a backslash, please check output carefully to ensure taxa names or ROI numbers have been properly sub string'd

vprr documentation built on July 12, 2022, 5:07 p.m.