effects_over_genome_plot: effects_over_genome_plot

In vqtl: Genome Scans to Accommodate and Target Genetic and Non-Genetic Effects on Trait Variance in Test Crosses

Description

Plots estimated effects and their standard errors at each locus in the genome.

Usage

effects_over_genome_plot(sov, covar_name_regex = ".",
  effect_type_regex = "(mean|var)", transform_var_effects = TRUE,
  se_ribbons = TRUE)

Arguments

sov	the scanonevar
covar_name_regex	regex that matches the covars we want to plot
effect_type_regex	regex that matches 'mean', 'var', or both
transform_var_effects	combine variance effects w intercept and exponentiate?
se_ribbons	Should a ribbon from estimate - se to estimate + se be plotted?

Value

the plot

vqtl documentation built on May 2, 2019, 3:29 p.m.