genoSxT: Genotypic marker data for Sunco x Tasman doubled haploid...

In wgaim: Whole Genome Average Interval Mapping for QTL Detection and Estimation using ASReml-R

Description

Linkage map marker data for the Sunco x Tasman doubled haploid population in the form of an R/qtl cross object.

Usage

data(phenoSxT)

Format

This data relates to a linkage map of 287 genetic markers genotyped on 190 individuals from the Sunco x Tasman population. This set is reduced from the original 345 markers (a mixture of AFLP, RFLP and microsatellite markers and protein analysis). The reduction was created by discarding 58 markers which were co-located with one or more other markers. The linkage map consists of 21 linkage groups with varying numbers of markers. Map distances have been estimated using read.cross() with the kosambi mapping function. The data is therefore an R/qtl cross object. See read.cross() documentation for more details on the format of this object.

Examples

data(genoSxT, package = "wgaim")
linkMap(genoSxT, cex = 0.5)

wgaim documentation built on Oct. 3, 2019, 9:03 a.m.