Description Usage Arguments Value Examples

The standard way within R of pulling values out of a named vector really bogs down on large data sets. So I will do this instead.

1 | ```
make_it_012(M)
``` |

`M` |
a character matrix of variant call format (VCF) genotypes and no dimnames. Allowable values are "0/0", and "0|0", which get coverted to integer 0; "0/1", "0|1", "1/0", and "1|0", which get converted to integer 1; and "1/1", and "1|1", which get converted to integer 2. Everything else gets converted to -1 to denote missing data. |

An integer matrix of values which are 0, 1, 2, or -1.

1 2 3 4 | ```
# get an 012 matrix from the lobster data
tmp <- t(vcfR::extract.gt(lobster_buz_2000, element = "GT"))
dimnames(tmp) <- NULL
g <- make_it_012(tmp)
``` |

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