addwmfs: Adds wavelet mean field information to a 'clust' object
In wsyn: Wavelet Approaches to Studies of Synchrony in Ecology and Other Fields

Description Usage Arguments Details Value Author(s) See Also Examples

When a clust object is created, the wmfs slot is NA. This function fills it in.

1	addwmfs(obj)

obj

An object of class clust

This function uses the values of scale.min, scale.max.input, sigma and f0 stored in obj$methodspecs. It is possible to create a clust object with bad values for these slots. This function throws an error in that case. You can use a correlation-based method for calculating the synchrony matrix and still pass values of scale.min, scale.max.input, sigma and f0 to clust (in fact, this happens by default) - they won't be used by clust, but they will be there for later use by addwmfs and addwpmfs.

addwmfs returns another clust object with wmfs slot now included. If obj$wmfs was not NA, the object is returned as is.

Daniel Reuman, reuman@ku.edu

clust, addwpmfs, browseVignettes("wsyn")

sig<-matrix(.8,5,5)
diag(sig)<-1
lents<-50
if (requireNamespace("mvtnorm",quietly=TRUE))
{
  dat1<-t(mvtnorm::rmvnorm(lents,mean=rep(0,5),sigma=sig))
  dat2<-t(mvtnorm::rmvnorm(lents,mean=rep(0,5),sigma=sig))
}else
{
  dat1<-t(matrix(rep(rnorm(lents),times=5),lents,5))
  dat2<-t(matrix(rep(rnorm(lents),times=5),lents,5))
}
dat<-rbind(dat1,dat2)
times<-1:lents
dat<-cleandat(dat,times,clev=1)$cdat
coords<-data.frame(Y=rep(0,10),X=1:10)
method<-"coh.sig.fast"
clustobj<-clust(dat,times,coords,method,nsurrogs = 100)
res<-addwmfs(clustobj)