Man pages for yatah
Yet Another TAxonomy Handler

abundancesAbundance table for 199 samples.
all_cladesExtract all clades present in the lineages
depthCommon depth
dot-allchrCharacters allowed in lineages
error_lineageThrow error if the string is not a lineage
is_cladeTest if a lineage belongs to a clade
is_lineageTest if a string is a lineage
is_rankTest if a lineage goes down to a specified rank
last_cladeExtract the last clade of a lineage
last_rankExtract the last rank of a lineage
taxtableTaxonomic table
taxtreeTaxonomic tree
trim_commonTrim lineages until the shallowest common rank.
trim_rankTrim lineages until a specified rank
trim_voidTrim void ranks in lineages
yatah-packageyatah: Yet Another TAxonomy Handler
yatah documentation built on Nov. 13, 2022, 1:07 a.m.