abundances: Abundance table for 199 samples.
In yatah: Yet Another TAxonomy Handler
abundances R Documentation
Abundance table for 199 samples.
Description
A dataset containing the abundances of 1585 lineages among 199 patients.
Usage
abundances
Format
A data.frame with 1585 rows and 200 variables:
- lineages
lineage (string)
- XXX
abundance of each lineage in the sample XXX (double)
Source
Zeller et al., 2014 (doi: 10.15252/msb.20145645),
Pasolli et al., 2017 (doi: 10.1038/nmeth.4468).
Examples
dim(abundances)
abundances[1:5, 1:7]
yatah documentation built on Nov. 13, 2022, 1:07 a.m.
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| abundances | R Documentation |
Abundance table for 199 samples.
Description
A dataset containing the abundances of 1585 lineages among 199 patients.
Usage
abundances
Format
A data.frame with 1585 rows and 200 variables:
- lineages
lineage (string)
- XXX
abundance of each lineage in the sample XXX (double)
Source
Zeller et al., 2014 (doi: 10.15252/msb.20145645), Pasolli et al., 2017 (doi: 10.1038/nmeth.4468).
Examples
dim(abundances) abundances[1:5, 1:7]
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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