Accio/BioQC: Detect tissue heterogeneity in expression profiles with gene sets

BioQC performs quality control of high-throughput expression data based on tissue gene signatures. It can detect tissue heterogeneity in gene expression data. The core algorithm is a Wilcoxon-Mann-Whitney test that is optimised for high performance.

Getting started

Package details

AuthorJitao David Zhang <[email protected]>, Laura Badi, Gregor Sturm, Roland Ambs
Bioconductor views GeneExpression GeneSetEnrichment QualityControl StatisticalMethod
MaintainerJitao David Zhang <[email protected]>
LicenseGPL (>=3)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Accio/BioQC documentation built on April 17, 2019, 2:58 p.m.