Files in AdamCottrill/glfishr

Fetch fisheries assessment data from the FN Portal

LICENSE.md R/api_to_dataframe.R R/build_query_string.R R/check_filters.R R/download_pt_files.R R/fetch_pt_associated_files.R R/fetch_pt_reports.R R/fetch_tfat_lookups.R R/get_Angler_Answers.R R/get_Angler_Questions.R R/get_FN011.R R/get_FN012.R R/get_FN012_protocol.R R/get_FN013.R R/get_FN022.R R/get_FN026.R R/get_FN026_Subspace.R R/get_FN028.R R/get_FN121.R R/get_FN121_Electrofishing.R R/get_FN121_GPS_Tracks.R R/get_FN121_Limno.R R/get_FN121_Trapnet.R R/get_FN121_Trawl.R R/get_FN121_Weather.R R/get_FN122.R R/get_FN123.R R/get_FN123_NonFish.R R/get_FN124.R R/get_FN125.R R/get_FN125_Lamprey.R R/get_FN125_Tags.R R/get_FN126.R R/get_FN127.R R/get_SC011.R R/get_SC012.R R/get_SC012_Lake.R R/get_SC012_Protocol.R R/get_SC022.R R/get_SC023.R R/get_SC024.R R/get_SC025.R R/get_SC026.R R/get_SC026_Subspace.R R/get_SC028.R R/get_SC111.R R/get_SC112.R R/get_SC121.R R/get_SC123.R R/get_SC124.R R/get_SC125.R R/get_SC125_Lamprey.R R/get_SC125_Tags.R R/get_SC126.R R/get_SC127.R R/get_Stream_Dimensions.R R/get_ageprep1.R R/get_ageprep2.R R/get_agest.R R/get_api_filters.R R/get_bottom_types.R R/get_clip_codes.R R/get_common_portal_root.R R/get_cover_types.R R/get_credentials.R R/get_domain.R R/get_fisheries_offices.R R/get_flen2tlen.R R/get_fn_portal_root.R R/get_gear_process_types.R R/get_gears.R R/get_grid5s.R R/get_grids_from_points.R R/get_gruse.R R/get_lakes.R R/get_management_units.R R/get_mu_list.R R/get_orientations.R R/get_prj_leads.R R/get_project_leads.R R/get_project_types.R R/get_pt_abstracts.R R/get_pt_associated_files.R R/get_pt_nr_milestones.R R/get_pt_points.R R/get_pt_portal_root.R R/get_pt_projects.R R/get_pt_reports.r R/get_sc_portal_root.R R/get_species.R R/get_tag_agencies.R R/get_tag_attr_values.R R/get_tag_colours.R R/get_tag_positions.R R/get_tag_types.R R/get_taxon_table.R R/get_tfat_anglers.R R/get_tfat_encounters.R R/get_tfat_projects.R R/get_tfat_recoveries.R R/get_tfat_reports.R R/get_tfat_root.R R/get_tissues.R R/get_token.R R/get_vessels.R R/glfishr_utils.R R/globals.R R/populate_template.R R/refresh_filters.R R/show_filters.R README.Rmd README.md man/add_missing_fn012.Rd man/add_special_filters.Rd man/api_to_dataframe.Rd man/append_data.Rd man/assign_fn012_sizesam.Rd man/augment_fn012.Rd man/build_query_string.Rd man/check_filters.Rd man/download_pt_files.Rd man/fetch_fn012_protocol_data.Rd man/fetch_pt_associated_files.Rd man/fetch_pt_reports.Rd man/fetch_sc012_protocol_data.Rd man/fetch_tfat_lookups.Rd man/fetching_report.Rd man/fill_missing_fn012_limits.Rd man/get_Angler_Answers.Rd man/get_Angler_Questions.Rd man/get_FN011.Rd man/get_FN012.Rd man/get_FN012_Protocol.Rd man/get_FN013.Rd man/get_FN022.Rd man/get_FN026.Rd man/get_FN026_Subspace.Rd man/get_FN028.Rd man/get_FN121.Rd man/get_FN121_Electrofishing.Rd man/get_FN121_GPS_Tracks.Rd man/get_FN121_Limno.Rd man/get_FN121_Trapnet.Rd man/get_FN121_Trawl.Rd man/get_FN121_Weather.Rd man/get_FN122.Rd man/get_FN123.Rd man/get_FN123_NonFish.Rd man/get_FN124.Rd man/get_FN125.Rd man/get_FN125_Lamprey.Rd man/get_FN125_Tags.Rd man/get_FN126.Rd man/get_FN127.Rd man/get_SC011.Rd man/get_SC012.Rd man/get_SC012_Lake.Rd man/get_SC012_Protocol.Rd man/get_SC022.Rd man/get_SC023.Rd man/get_SC024.Rd man/get_SC025.Rd man/get_SC026.Rd man/get_SC026_Subspace.Rd man/get_SC028.Rd man/get_SC111.Rd man/get_SC112.Rd man/get_SC121.Rd man/get_SC123.Rd man/get_SC124.Rd man/get_SC125.Rd man/get_SC125_Lamprey.Rd man/get_SC125_Tags.Rd man/get_SC126.Rd man/get_SC127.Rd man/get_Stream_Dimensions.Rd man/get_ageprep1.Rd man/get_ageprep2.Rd man/get_agest.Rd man/get_api_filters.Rd man/get_assessment_data.Rd man/get_bottom_types.Rd man/get_clip_codes.Rd man/get_common_portal_root.Rd man/get_cover_types.Rd man/get_credentials.Rd man/get_creel_data.Rd man/get_domain.Rd man/get_fisheries_offices.Rd man/get_flen2tlen.Rd man/get_fn_portal_root.Rd man/get_gear.Rd man/get_gear_process_types.Rd man/get_grid5s.Rd man/get_grid5s_from_points.Rd man/get_gruse.Rd man/get_lakes.Rd man/get_management_units.Rd man/get_mu_list.Rd man/get_orientations.Rd man/get_prj_leads.Rd man/get_project_leads.Rd man/get_project_types.Rd man/get_pt_abstracts.Rd man/get_pt_associated_files.Rd man/get_pt_nr_milestones.Rd man/get_pt_points.Rd man/get_pt_portal_root.Rd man/get_pt_projects.Rd man/get_pt_reports.Rd man/get_sc_portal_root.Rd man/get_species.Rd man/get_swagger_url.Rd man/get_tag_agencies.Rd man/get_tag_attr_values.Rd man/get_tag_colours.Rd man/get_tag_positions.Rd man/get_tag_types.Rd man/get_taxon_table.Rd man/get_tfat_encounters.Rd man/get_tfat_projects.Rd man/get_tfat_recoveries.Rd man/get_tfat_reporters.Rd man/get_tfat_reports.Rd man/get_tfat_root.Rd man/get_tissues.Rd man/get_token.Rd man/get_trg_table_names.Rd man/get_vessels.Rd man/join_fn_fields.Rd man/parse_swagger_payload.Rd man/pluck_dataframe.Rd man/populate_db.Rd man/populate_fn012.Rd man/populate_gept.Rd man/populate_template.Rd man/prepare_payload.Rd man/prune_unused_fn012.Rd man/refresh_filters.Rd man/show_filters.Rd man/sync_flds.Rd man/uncount_tally.Rd man/validate_glis_data.Rd sandbox/populate_template/src/populate_template_assessment.R sandbox/populate_template/src/utils.R tests/testthat.R tests/testthat/intra.glis.mnr.gov.on.ca/api-auth/token-6ff938-POST.R tests/testthat/intra.glis.mnr.gov.on.ca/api-auth/token-b1a879-POST.R tests/testthat/setup.R tests/testthat/test-add_missing_fn012.R tests/testthat/test-add_special_filters.R tests/testthat/test-assign_fn012_sizsam.R tests/testthat/test-build_query_string.R tests/testthat/test-fill_missing_species_limits.R tests/testthat/test-get_common_portal_root.R tests/testthat/test-get_credentials.R tests/testthat/test-get_domain.R tests/testthat/test-get_fn_portal_root.R tests/testthat/test-get_pt_portal_root.R tests/testthat/test-get_sc_portal_root.R tests/testthat/test-get_swagger_payload.R tests/testthat/test-get_swagger_url.R tests/testthat/test-get_tfat_root.R tests/testthat/test-get_token.R tests/testthat/test-parse_swagger_payload.R tests/testthat/test-populate_gept.R tests/testthat/test-prepare_payload.R tests/testthat/test-prune_unused_fn012.R tests/testthat/test-sam_slug.R tests/testthat/test-truncate_slug.R