getTaxonMap: Project a set of datapoints onto the nodes of principal graph

In Albluca/rpgraph: r interface to VDAOEngine to build elastic principal graphs

Description

The function depends on a working JVM with the VDAOEngine.jar library in the libpath.

Usage

getTaxonMap(Results, Data, UseR = TRUE)

Arguments

Data	A matrix containing a set of points with the correct number of dimensions. Each row represent a point
UseR	A bolean indicating the use of R (TRUE) of the Java library to perform the projections
PrintGraph	An elastic principal graph structure as returned from link{computeElasticPrincipalGraph}

Value

A list. Each elements of the list represent the vertex of the principal graph and contains a vector reporting the cells (as row number) that are associted with that particular vertex. The vector equal to NA indicates that no cells are associated with that vertex;

Albluca/rpgraph documentation built on May 5, 2019, 1:35 p.m.