barplot_graft_formation: Barplot of up- and down- regulated differentially expressed...

In AlexGa/GraftingScripts: Reproducible scripts for studying the graft formation

Description

Plots the relative or absolute number of up- and down- regulated genes and a asterisks if the ratio is significant

Usage

barplot_graft_formation(count_mat, pval_mat, ylab="# genes intersecting", pval_threshold = 0.05, main)

Arguments

count_mat	number of genes during each time point for each condition
pval_mat	matrix of p-values for each time point and each treatment. Indicating if ratio of up- and down- regulated genes is significant compared to the background.
ylab	defines the label of the y-axis
pval_threshold	p-value threshold to indocate if a p-value is significant
main	defines the title of the plot

Value

a barplot

Author(s)

Alexander Gabel

AlexGa/GraftingScripts documentation built on May 26, 2019, 9:34 a.m.