get_top_markers: Extract top markers from find_markers() results

In AlexanderKirchmair/datamisc: Various functions for data handling

Extract top markers from find_markers() results

Description

Extract top markers from find_markers() results

Usage

get_top_markers(
  markers,
  n = 5,
  per_group = TRUE,
  distinct = FALSE,
  group_col = "group",
  feature_col = "gene",
  filter_pattern = NULL,
  ...
)

Arguments

markers	Dataframe
n	Number of top features
per_group	Get features per group
distinct	Count each feature only once
...

Examples

get_seu_dataset() |> find_markers(group_by = "seurat_annotations") |> get_top_markers()

AlexanderKirchmair/datamisc documentation built on June 13, 2025, 5:26 a.m.