API for Alice-MacQueen/CDBNgenomics
Genomics Using the Cooperative Dry Bean Nursery Dataset
| Global functions | |
|---|---|
| %>% | Man page |
| BLUPs | Man page |
| Pv_GO | Man page |
| Pv_kegg | Man page |
| anno_info | Man page |
| bigsnp2anno | Source code |
| cdbn_bigsnp2mashr | Man page Source code |
| cdbn_gwas | Man page |
| cdbn_standard_gwas | Man page Source code |
| expand_cov | Man page Source code |
| gapit2anno | Source code |
| gapit_model_selection | Man page Source code |
| gapit_results_in_filepath | Man page Source code |
| get_GxE | Man page Source code |
| get_SVD | Man page Source code |
| get_U_by_mass | Man page Source code |
| get_Ulist | Source code |
| get_annotations | Man page Source code |
| get_best_PC_df | Man page |
| get_colnames | Man page Source code |
| get_date_filename | Man page Source code |
| get_estimated_pi | Man page Source code |
| get_estimated_pi_no_collapse | Source code |
| get_kinship | Man page Source code |
| get_lambda_GC | Man page |
| get_lambdagc | Man page |
| get_log10bf | Man page Source code |
| get_loglik | Source code |
| get_marker_df | Man page Source code |
| get_n_significant_conditions | Man page Source code |
| get_ncond | Man page Source code |
| get_pairwise_sharing | Man page Source code |
| get_qqplot | Man page |
| get_results_in_folder | Man page Source code |
| get_significant_results | Man page Source code |
| get_tidy_annos | Source code |
| get_top_effects_log10p | Man page Source code |
| get_top_snps | Source code |
| load_g2m_df | Man page Source code |
| make_U_ed | Source code |
| mash2anno | Source code |
| mash_plot_Ulist | Man page Source code |
| mash_plot_covar | Man page Source code |
| mash_plot_effects | Man page Source code |
| mash_plot_manhattan_by_condition | Man page Source code |
| mash_plot_pairwise_sharing | Man page Source code |
| mash_plot_sig_by_condition | Man page Source code |
| mash_standard_run | Man page Source code |
| metadata | Man page |
| multiply_list | Source code |
| reorder_cormat | Man page Source code |
| round2 | Man page |
| round_xy | Man page |
| rqtl2anno | Source code |
| s_hat_bigsnp | Man page Source code |
| scale_cov | Man page Source code |
| theme_oeco | Man page |
| txdb | Man page |
