Files in AllenInstitute/L5_VEN

R/Seurat_functions.R R/data.R R/heatmap_functions.R R/other_functions.R R/qc_functions.R R/scrattch_functions.R R/violin_functions.R README.md man/ExtractField.Rd man/FI_layer5_count_data.Rd man/FI_layer5_sample_information.Rd man/FindNeighbors.Rd man/LogSeuratCommand.Rd man/annotate_cat.Rd man/annotate_factor.Rd man/annotate_num.Rd man/auto_annotate.Rd man/build_header_labels.Rd man/build_layer_plot.Rd man/build_legend_plot.Rd man/calc_beta.Rd man/clusterInfoMTG.Rd man/compareClusterCalls.Rd man/error.bar.Rd man/errorBarPlot.Rd man/findFromGroups.Rd man/formatPlotGenes.Rd man/getAnovaPvalforApply.Rd man/getBetaScore.Rd man/getDend.Rd man/getTopMarkersByProp.Rd man/getTopMarkersByProp2.Rd man/getTopMarkersByPropNew.Rd man/get_feather_data.Rd man/get_node_dend.Rd man/group_annotations.Rd man/group_heatmap_plot.Rd man/group_violin_plot.Rd man/hello.Rd man/labelDend.Rd man/meanEx.Rd man/mito_genes.Rd man/mixColors.Rd man/mouse2human2.Rd man/plot_dend.Rd man/plot_dend2.Rd man/pt2mm.Rd man/qcPlot.Rd man/rankCompleteDendPlot.Rd man/renameClusters.Rd man/reorder.dend.Rd man/reorder_matrix.Rd man/rowMax.Rd man/sample_heatmap_plot.Rd man/sci_label.Rd man/sex_genes.Rd man/subsampleCells.Rd man/summarySE.Rd man/t.test.l.Rd man/t.test.l.paired.Rd man/updateAndOrderClusters.Rd man/updateSampDat.Rd man/values_to_colors.Rd man/varibow.Rd vignettes/Code1_prepareComparisonDataSets.Rmd vignettes/Code2_clusterNames_buildTree_Fig1.Rmd vignettes/Code3_QC_assessment_FigS1.Rmd vignettes/Code4_crossSpeciesComparisons.Rmd vignettes/Code5_humanMTGvsFI.Rmd