Description Usage Arguments Value Examples
Plot gene expression values for each structure in each donor for the fetal human brain atlas. This function requires the fetdata package (https://github.com/AllenInstitute/fetdata), and is a thin wrapper around a modified version of WGCNA's verboseBarplot.
1 2 3 4 5 6 7 | fet_subregions_plot(
gene,
log_transform = FALSE,
im_height = 10,
im_width = 50,
save_pdf = TRUE
)
|
gene |
Gene in the 'fetdata::datFET' data set; character string |
log_transform |
Boolean for plotting of linear or log data |
im_height |
PDF image height |
im_width |
PDF image width |
save_pdf |
Save to disk or output to console |
Creates a new plot of the gene in the current working directory; label as 'GENE_fetalHuman_structureBarPlotAll.pdf'
1 2 | # call on a given gene
fet_subregions_plot("SHH")
|
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