mean_scale: mean_scale

In AlmaasLab/micInt: Find microbial interactions

mean_scale

Description

Creates sim.measure objects which devide each compontent of by its mean before performing the calculations #' @examples library(micInt) sim_measures <- similarity_measures(subset = c("pearson","spearman","jaccard","bray_curtis)) mean_scaled_sim_measures <- noisify(sim_measures,append = FALSE) mean_scaled_sim_measures The Bray-Curtis similarity is the only one returned due to its properties mean_scaled_sim_measures_append <- noisify(sim_measures,append = TRUE) mean_scaled_sim_measures_append

Usage

mean_scale(sim.scores = similarity_measures(), append = TRUE)

Arguments

sim.scores	A list of sim.measure objects
append	Logical, should the sim.scores passed to the function also be returned?

AlmaasLab/micInt documentation built on April 1, 2022, 10:37 a.m.