plotCorMatrix: Plot a correlation matrix within a plate or between plates
In AndersenLab/COPASutils: Tools for processing COPAS large-particle flow cytometer data
Description
Usage
Arguments
Examples
Description
Returns a ggplot2 object of a correlation plot for all traits within a single plate or between two plates. The data from each plate must be summarized prior to being passed to this function.
Usage
1
plotCorMatrix(plate_summary1, plate_summary2 = plate_summary1)
Arguments
plate_summary1
one summarized plate to compare in the correlation matrix
plate_summary2
an optional summarized plate to compare with plate_summary1, defaults to plate_summary1; if no argument is entered plate_summary1 will be compared to itself
Examples
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#### COPASutils Figures
### Figure 4
# library(dplyr)
# sumDose <- summarizePlate(doseData)
# corDose <- select(sumDose, -n.sorted)
# plotCorMatrix(corDose)
AndersenLab/COPASutils documentation built on May 5, 2019, 4:57 a.m.
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Description Usage Arguments Examples
Description
Returns a ggplot2 object of a correlation plot for all traits within a single plate or between two plates. The data from each plate must be summarized prior to being passed to this function.
Usage
1 | plotCorMatrix(plate_summary1, plate_summary2 = plate_summary1)
|
Arguments
plate_summary1 |
one summarized plate to compare in the correlation matrix |
plate_summary2 |
an optional summarized plate to compare with plate_summary1, defaults to plate_summary1; if no argument is entered plate_summary1 will be compared to itself |
Examples
1 2 3 4 5 6 | #### COPASutils Figures
### Figure 4
# library(dplyr)
# sumDose <- summarizePlate(doseData)
# corDose <- select(sumDose, -n.sorted)
# plotCorMatrix(corDose)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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