Description Usage Arguments Examples
Returns a data frame with one row per well with summary statistics.
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plate |
plate to summarize, must be run through readSorterData, not readSorter |
strains |
a vector of all strain (sample) names input row-wise to add to the data frame |
quantiles |
if TRUE, columns of trait quantiles (every fifth) will be added to the output dataframe, defaults to FALSE |
log |
if TRUE, columns of log transformed EXT and red fluorescence will be added to output dataframe, defaults to FALSE |
ends |
if TRUE, columns of min and max values for all traits will be added to output dataframe, defaults to FALSE |
1 2 3 | # exampleStrains <- rep(c("N2", NA), times=48)
# plate1 <- summarizePlate(plateData1, quantiles=TRUE, log=TRUE, ends=TRUE)
# plate2 <- summarizePlate(plateData2, strains=exampleStrains)
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