combine_voom: Combine 2 voom objects into 1

In BIGslu/RNAetc: RNA-seq Data Cleaning And Analysis

Combine 2 voom objects into 1

Description

Combine 2 voom objects into 1

Usage

combine_voom(dat1, dat2, libraryID = "libID")

Arguments

dat1	EList voom object resulting from voom() or voomWithQualityWeights()
dat2	EList voom object resulting from voom() or voomWithQualityWeights()
libraryID	Character. Column name in dat$targets that matches column names in dat$E

Value

data frame

Examples

example.voom <- example.voom
example.voom$design <- NULL
dat1 <- subset_voom(example.voom, lib_filter="virus=='none'")
dat2 <- subset_voom(example.voom,
               lib_keep=c("lib1","lib2","lib4","lib6","lib8","lib10","lib12"))
combined <- combine_voom(dat1, dat2)

BIGslu/RNAetc documentation built on Feb. 13, 2025, 7:42 a.m.