Files in BenjamenSimon/EpidemicR

Stochastic modelling and inference for epidemics.

R/Avg_acc_probs.R R/Beta_mat_form.R R/Dist_mat_clust.R R/Dist_mat_edge.R R/Dist_mat_latt.R R/Dist_mat_lines.R R/Dist_mat_trials.R R/Dist_mat_unif.R R/Folded_draw.R R/GSE_sim.R R/Hist_posteriors.R R/Initialise_2b.R R/MCMC.R R/MCMC_homo.R R/MCMC_reparam.R R/MH_accept.R R/MH_accept_MRW.R R/P_mat_form.R R/Plot_epidemic.R R/Seed_finder.R R/chris_integral_part.R R/chris_integral_part_0.R R/chris_interval_intersect.R R/chris_interval_intersect_0.R R/chris_log_likelihood.R R/chris_log_likelihood_0.R R/chris_prod_part.R R/integral_part.R R/interval_intersect.R R/log_likelihood.R R/plot_trace.R R/prod_part.R R/simple_integral_part.R R/simple_log_likelihood.R R/simple_prod_part.R man/Avg_acc_probs.Rd man/Beta_mat_form.Rd man/Dist_mat_clust.Rd man/Dist_mat_edge.Rd man/Dist_mat_latt.Rd man/Dist_mat_lines.Rd man/Dist_mat_trials.Rd man/Dist_mat_unif.Rd man/Folded_draw.Rd man/GSE_sim.Rd man/Hist_posteriors.Rd man/Initialise_2b.Rd man/MCMC.Rd man/MCMC_homo.Rd man/MCMC_reparam.Rd man/MH_accept.Rd man/MH_accept_MRW.Rd man/P_mat_form.Rd man/Plot_epidemic.Rd man/Plot_trace.Rd man/Seed_finder.Rd man/chris_integral_part.Rd man/chris_integral_part_0.Rd man/chris_interval_intersect.Rd man/chris_interval_intersect_0.Rd man/chris_log_likelihood.Rd man/chris_log_likelihood_0.Rd man/chris_prod_part.Rd man/integral_part.Rd man/interval_intersect.Rd man/log_likelihood.Rd man/prod_part.Rd man/simple_integral_part.Rd man/simple_log_likelihood.Rd man/simple_prod_part.Rd