getAB: getAB

In BenjaminChittick/BenCScore: Methods For Analysis of High-Throughput Screens

Description

This function splits screening data by a user supplied factor e.g. a compound ID and estimates a prior distribution of variance from replicates using the estimateAB function

Usage

getAB(screen, role, variable)

Arguments

screen	A data frame or data table containing screening data with columns: Plate_ID, Row, Column, Compound_ID, Well_Type, Run_ID, Compound_Plate, Value. See documentation for further description of column values
role	character string indicating which well type to subset data must be one of: 'positive control', 'negative control', or 'compound'

Examples

Load screen
data(mdmx)
ab <- getAB(mdmx, 'compound', 'Compound_ID')[[1]]

BenjaminChittick/BenCScore documentation built on May 5, 2019, 2:41 p.m.