nBayes: nBayes

In BenjaminChittick/BenCScore: Methods For Analysis of High-Throughput Screens

Description

Deprecated: Estimate the probability of a compound coming from the neutral control distribution assuming the compounds and neutral controls are normally distributed with unknown mu and tau.

Usage

nBayes(screen, alternative, ROPE, mu0 = 0, n0 = 0.01, size = 20000)

Arguments

screen	A data frame or data table containing screening data with variables: Plate_ID, Row, Column, Compound_ID, Well_Type, Plate_Mask, Well_Mask, Value. For an explination of variables see read me.
alternative	A character string specifying the alternet hypothesis. Must be one of "two.sided", "greater", or "less".

Examples

Load screen
data(mdmx)
mdmx <- nBayes(mdmx, alternative='less')
head(mdmx)

BenjaminChittick/BenCScore documentation built on May 5, 2019, 2:41 p.m.