set_BXD_names: Set the fields to retrieve for the application

In BigelowLab/blastxml: Extract data from Blast XML files

Description

Set the fields to retrieve for the application

Usage

set_BXD_names(x, bxd = BXD())

Arguments

x	a character vector of names or NULL. If NULL nothing is done.
bxd	a BXD() like list

Value

the possibly updated BXD global

Examples

 ## Not run: 
     xmlfile <- system.file("extdata", "blastn.xml.gz", package = "blastxml")
     bxd <- BXD(app = 'blastn')
     fields <- get_BXD_names()
     len <- length(fields)
     fields <- fields[-c((len-3):len)]
     bxd <- set_BXD_names(fields, bxd = bxd)
     x <- blastxml_dump(xmlfile, bxd = bxd)
 
## End(Not run)  

BigelowLab/blastxml documentation built on May 5, 2019, 2:42 p.m.