Files in BigelowLab/genologicsr
A simplified interface between XML nodes and the Genologics RESTful API
DESCRIPTION
NAMESPACE
R/Artifact.R
R/ArtifactGroup.R
R/Container.R
R/Containertype.R
R/Exception.R
R/Field.R
R/File.R
R/InputOutputMap.R
R/Instrument.R
R/Lab.R
R/Lims.R
R/Node.R
R/Process.R
R/Processtype.R
R/Project.R
R/Projects.R
R/Protocol.R
R/Researcher.R
R/Sample.R
R/Stage.R
R/Step.R
R/Udf.R
R/Workflow.R
R/file_transfer.R
R/genologicsr_package.R
R/misc.R
R/route.R
README.md
man/A01.Rd
man/ArtifactGroupRefClass-class.Rd
man/ArtifactGroupRefClass_get_artifacts.Rd
man/ArtifactGroupRefNode_DELETE.Rd
man/ArtifactGroupRefNode_POST.Rd
man/ArtifactGroupRefNode_PUT.Rd
man/ArtifactRefClass-class.Rd
man/ArtifactRefClass_get_artifact_groups.Rd
man/ArtifactRefClass_get_container.Rd
man/ArtifactRefClass_get_file_artifact.Rd
man/ArtifactRefClass_get_parent_process.Rd
man/ArtifactRefClass_get_sample.Rd
man/ArtifactRefClass_get_samples.Rd
man/ArtifactRefClass_get_wellname.Rd
man/ArtifactRefClass_location.Rd
man/ArtifactRefClass_qc_flag.Rd
man/ArtifactRefClass_working_flag.Rd
man/ArtifactRefNode_DELETE.Rd
man/ArtifactRefNode_POST.Rd
man/ArtifactRefNode_show.Rd
man/ContainerRefClass-class.Rd
man/ContainerRefClass_POST.Rd
man/ContainerRefClass_get_artifacts.Rd
man/ContainerRefClass_get_placements.Rd
man/ContainerRefClass_get_samples.Rd
man/ContainerRefClass_get_type.Rd
man/ContainerRefClass_n_empty.Rd
man/ContainerRefClass_n_occupied.Rd
man/ContainerRefClass_n_wells.Rd
man/ContainerRefClass_required_namespaces.Rd
man/ContainerRefClass_show.Rd
man/ContainerRefClass_well_occupied.Rd
man/ContainerTypeRefClass-class.Rd
man/ExceptionRefClass-class.Rd
man/FieldRefClass-class.Rd
man/FieldRefClass_DELETE.Rd
man/FieldRefClass_POST.Rd
man/FieldRefClass_get_type.Rd
man/FieldRefClass_show.Rd
man/FileRefClass-class.Rd
man/FileRefClass_download.Rd
man/FileRefClass_show.Rd
man/InputOutputMapRefClass-class.Rd
man/InputOutputMapRefClass_DELETE.Rd
man/InputOutputMapRefClass_GET.Rd
man/InputOutputMapRefClass_POST.Rd
man/InputOutputMapRefClass_PUT.Rd
man/InputOutputMapRefClass_show.Rd
man/InstrumentRefClass_POST.Rd
man/InstrumentRefClass_PUT.Rd
man/LabRefClass-class.Rd
man/Lims.Rd
man/LimsRefClass-class.Rd
man/LimsRefClass_ATTACH.Rd
man/LimsRefClass_BROWSE.Rd
man/LimsRefClass_DELETE.Rd
man/LimsRefClass_GET.Rd
man/LimsRefClass_LIST.Rd
man/LimsRefClass_POST.Rd
man/LimsRefClass_PUSH.Rd
man/LimsRefClass_PUT.Rd
man/LimsRefClass_batchcreate.Rd
man/LimsRefClass_batchretrieve.Rd
man/LimsRefClass_batchupdate.Rd
man/LimsRefClass_check.Rd
man/LimsRefClass_create_exception.Rd
man/LimsRefClass_get_artifactgroups.Rd
man/LimsRefClass_get_artifacts.Rd
man/LimsRefClass_get_byLimsid.Rd
man/LimsRefClass_get_containers.Rd
man/LimsRefClass_get_containertypes.Rd
man/LimsRefClass_get_fields.Rd
man/LimsRefClass_get_instruments.Rd
man/LimsRefClass_get_labs.Rd
man/LimsRefClass_get_max_requests.Rd
man/LimsRefClass_get_or_create_containers.Rd
man/LimsRefClass_get_processes.Rd
man/LimsRefClass_get_processtypes.Rd
man/LimsRefClass_get_projects.Rd
man/LimsRefClass_get_researchers.Rd
man/LimsRefClass_get_samples.Rd
man/LimsRefClass_get_workflows.Rd
man/LimsRefClass_name_host.Rd
man/LimsRefClass_set_max_requests.Rd
man/LimsRefClass_show-Sample.Rd
man/LimsRefClass_uri.Rd
man/LimsRefClass_userpwd.Rd
man/LimsRefClass_validate_session.Rd
man/NodeRefClass-class.Rd
man/NodeRefClass_ATTACH.Rd
man/NodeRefClass_BROWSE.Rd
man/NodeRefClass_DELETE.Rd
man/NodeRefClass_GET.Rd
man/NodeRefClass_POST.Rd
man/NodeRefClass_PUT.Rd
man/NodeRefClass_add_namespaces.Rd
man/NodeRefClass_get_attached_files.Rd
man/NodeRefClass_get_childv.Rd
man/NodeRefClass_get_field.Rd
man/NodeRefClass_get_limsid.Rd
man/NodeRefClass_get_type.Rd
man/NodeRefClass_get_udfs.Rd
man/NodeRefClass_has_child.Rd
man/NodeRefClass_has_lims.Rd
man/NodeRefClass_new.Rd
man/NodeRefClass_required_namespaces.Rd
man/NodeRefClass_set_udfs.Rd
man/NodeRefClass_show.Rd
man/NodeRefClass_toString.Rd
man/NodeRefClass_unames.Rd
man/NodeRefClass_update.Rd
man/ProcessRefClass-class.Rd
man/ProcessRefClass_date_run.Rd
man/ProcessRefClass_get_artifacts.Rd
man/ProcessRefClass_get_file_artifacts.Rd
man/ProcessRefClass_get_inputoutputmap.Rd
man/ProcessRefClass_get_parent_process.Rd
man/ProcessRefClass_get_type.Rd
man/ProcessRefClass_instrument.Rd
man/ProcessRefClass_show.Rd
man/ProcessRefClass_technician.Rd
man/ProcessTypeRefClass-class.Rd
man/ProcessTypeRefClass_get_fields.Rd
man/ProcessTypeRefClass_get_inputs.Rd
man/ProcessTypeRefClass_get_outputs.Rd
man/ProjectRefClass-class.Rd
man/ProjectRefClass_get_artifacts.Rd
man/ProjectRefClass_get_containers.Rd
man/ProjectRefClass_get_date.Rd
man/ProjectRefClass_get_researcher.Rd
man/ProjectRefClass_get_samples.Rd
man/ProjectRefNode_DELETE.Rd
man/ProjectRefNode_POST.Rd
man/ProjectsRefClass-class.Rd
man/ProjectsRefClass_DELETE.Rd
man/ProjectsRefClass_PUT.Rd
man/ProjectsRefClass_get_projects.Rd
man/ProjectsRefClass_get_projects_uri.Rd
man/ProtocolRefClass-class.Rd
man/ResearcherRefClass-class.Rd
man/ResearcherRefClass_DELETE.Rd
man/ResearcherRefClass_POST.Rd
man/ResearcherRefClass_get_credentials.Rd
man/ResearcherRefClass_get_lab.Rd
man/ResearcherRefClass_get_name.Rd
man/ResearcherRefClass_get_username.Rd
man/ResearcherRefClass_show.Rd
man/ResearcherRefClass_update.Rd
man/SampleRefClass-class.Rd
man/SampleRefClass_get_all_artifacts.Rd
man/SampleRefClass_get_artifact.Rd
man/SampleRefClass_get_biosource.Rd
man/SampleRefClass_get_container.Rd
man/SampleRefClass_get_location.Rd
man/SampleRefClass_get_project.Rd
man/SampleRefNode_DELETE.Rd
man/SampleRefNode_POST.Rd
man/SampleRefNode_show.Rd
man/StageRefClass-class.Rd
man/StageRefClass_get_protocol.Rd
man/StageRefClass_get_step.Rd
man/StageRefClass_get_workflow.Rd
man/StepRefClass-class.Rd
man/WorkflowRefClass-class.Rd
man/WorkflowRefClass_get_protocols.Rd
man/WorkflowRefClass_get_stages.Rd
man/as_ascii.Rd
man/batch_create.Rd
man/batch_retrieve.Rd
man/batch_update.Rd
man/build_config_path.Rd
man/build_query.Rd
man/check_type.Rd
man/cp_download.Rd
man/create_artifacts_details.Rd
man/create_artifacts_links.Rd
man/create_container_node.Rd
man/create_containers_details.Rd
man/create_exception_node.Rd
man/create_file_node.Rd
man/create_iom_analyte.Rd
man/create_iom_resultfile.Rd
man/create_iom_shared_resultfile.Rd
man/create_lab_node.Rd
man/create_process_node.Rd
man/create_project_node.Rd
man/create_researcher_node.Rd
man/create_routing.Rd
man/create_routing_artifacts.Rd
man/create_sample_node.Rd
man/create_samples_details.Rd
man/create_udf_node.Rd
man/duck_download.Rd
man/duck_upload.Rd
man/extract_udfs.Rd
man/genologicsr.Rd
man/get_NSMAP.Rd
man/get_childvalue.Rd
man/get_config.Rd
man/get_udfs.Rd
man/get_uri.Rd
man/has_duck.Rd
man/has_rsync.Rd
man/has_scp.Rd
man/is_exception.Rd
man/is_xmlNode.Rd
man/list_resource.Rd
man/parse_node.Rd
man/plural.Rd
man/read_config.Rd
man/rsync_download.Rd
man/rsync_upload.Rd
man/scp_download.Rd
man/scp_upload.Rd
man/set_udfs.Rd
man/singular.Rd
man/split_vector.Rd
man/trimuri.Rd
man/try_GET.Rd
man/udf_type2R.Rd
man/unames.Rd
man/xmlString.Rd
man/xml_atts.Rd
man/xml_name.Rd
man/xml_string.Rd
man/xml_value.Rd
