Bioconductor/IRanges: Infrastructure for manipulating intervals on sequences

Provides efficient low-level and highly reusable S4 classes for storing, manipulating and aggregating over annotated ranges of integers. Implements an algebra of range operations, including efficient algorithms for finding overlaps and nearest neighbors. Defines efficient list-like classes for storing, transforming and aggregating large grouped data, i.e., collections of atomic vectors and DataFrames.

Getting started

Package details

AuthorH. Pagès, P. Aboyoun and M. Lawrence
Bioconductor views DataRepresentation Infrastructure
MaintainerBioconductor Package Maintainer <[email protected]>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
Bioconductor/IRanges documentation built on Feb. 15, 2019, 2:25 p.m.