calcProb: Calculate the hypergeometric probability of the subgraph's...

In Bioconductor/graph: graph: A package to handle graph data structures

Calculate the hypergeometric probability of the subgraph's number of edges.

Description

calcProb calculates the probability of having the number of edges found in the subgraph given that it was made from origgraph. The hypergeometric distribution is used to calculate the probability (using the pdf).

Usage

calcProb(subgraph, origgraph)

Arguments

subgraph	subgraph made from the original graph
origgraph	original graph object from which the subgraph was made

Value

The probability of the subgraph's number of edges is returned.

Author(s)

Elizabeth Whalen

See Also

calcSumProb

Examples

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Bioconductor/graph documentation built on May 4, 2024, 4:54 p.m.