listEdges: List the Edges of a Graph

In Bioconductor/graph: graph: A package to handle graph data structures

List the Edges of a Graph

Description

A list where each element contains all edges between two nodes, regardless of orientation. The list has names which are node pairs, in lexicographic order, and elements all edges between those nodes.

Usage

listEdges(object, dropNULL=TRUE)

Arguments

object	An instance of the graphNEL-class class.
dropNULL	Should those node pairs with no edges be dropped from the returned list.

Details

The function is currently only implemented for graphs of the graphNEL-class. The edges in the returned list are instances of the simpleEdge-class.

Value

A named list of simpleEdge-class objects.

Author(s)

R. Gentleman

See Also

simpleEdge-class, edges

Examples

        set.seed(123)
        V <- LETTERS[1:4]
        edL <- vector("list", length=4)
        names(edL) <- V
        toE <- LETTERS[4:1]
        for(i in 1:4) 
           edL[[i]] <- list(edges=5-i, weights=runif(1))
        gR <- graphNEL(nodes=V, edgeL=edL)
        listEdges(gR)

Bioconductor/graph documentation built on May 4, 2024, 4:54 p.m.