getResults: Get the results table from query

In BioinformaticsFMRP/TCGAbiolinks: TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data

Get the results table from query

Description

Get the results table from query, it can select columns with cols argument and return a number of rows using rows argument.

Usage

getResults(query, rows, cols)

Arguments

query	A object from GDCquery
rows	Rows identifiers (row numbers)
cols	Columns identifiers (col names)

Value

Table with query results

Examples

query <- GDCquery(
  project = "TCGA-GBM",
  data.category = "Transcriptome Profiling",
  data.type = "Gene Expression Quantification",
  workflow.type = "STAR - Counts",
  barcode = c("TCGA-14-0736-02A-01R-2005-01", "TCGA-06-0211-02A-02R-2005-01")
)
results <- getResults(query)

BioinformaticsFMRP/TCGAbiolinks documentation built on April 12, 2024, 2:08 a.m.